FEDI
1.0.1

Install

  • Before You Install
    • Acknowledging this Work
    • Disclaimer
    • License
  • Installing FEDI
    • Installation Methods
      • Option 1: Install via pip
      • Option 2: Clone the Repository
      • Option 3: Conda Environment (Coming Soon)
    • Verifying Installation
    • Dependencies
      • Required Python Packages:
      • Required for Specific Features:
      • Required External Tools:
    • Getting Help

Getting Started

  • Fetal and Neonatal MRI Overview
    • Key Applications
    • Imaging Challenges

FEDI Modules

  • FEDI Command-Line Tools
    • fedi_dmri_outliers
    • fedi_dmri_qweights
    • fedi_dmri_recon
    • fedi_dmri_moco
    • fedi_apply_transform
    • fedi_dmri_snr
    • fedi_dmri_rotate_bvecs
    • fedi_dmri_reg
    • fedi_dmri_fod
    • fedi_testing

FEDI Workflows

  • HAITCH: Motion Correction
    • HAITCH Pipeline Steps
    • Accessing the HAITCH Pipeline Code
    • Sampling Schemes
    • Results and Visualizations
  • Fiber Orientation Estimation with sCNN
    • Key Features
    • Results and Visualizations
    • Accessing the FOD Estimation Code
    • Integration with HAITCH Pipeline

Developer Section

  • Development Team
FEDI
  • Search

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